| Options | ||
|---|---|---|
| seed | ■ | |
| stepSizeSec (s) | 1 | |
| verbosity | 1 | |
| Parameters | ||
| dnaPolymeraseElongationRate (nt/s) | 100 | |
| laggingBackupClampReloadingLength (nt) | 750 | |
| ligaseRate (1/s) | 0.04 | |
| okazakiFragmentMeanLength (nt) | 1500 | |
| primerLength (nt) | 11 | |
| rnaPolymeraseCollisionMeanDwellTime (s) | 1.7 | |
| ssbComplexSpacing (nt) | 30 | |
| ssbDissociationRate (1/s) | 0.3 | |
| startingOkazakiLoopLength (nt) | 50 | |
